Package: eSDM 0.4.4

Sam Woodman

eSDM: Ensemble Tool for Predictions from Species Distribution Models

A tool which allows users to create and evaluate ensembles of species distribution model (SDM) predictions. Functionality is offered through R functions or a GUI (R Shiny app). This tool can assist users in identifying spatial uncertainties and making informed conservation and management decisions. The package is further described in Woodman et al (2019) <doi:10.1111/2041-210X.13283>.

Authors:Sam Woodman [aut, cre]

eSDM_0.4.4.tar.gz
eSDM_0.4.4.zip(r-4.5)eSDM_0.4.4.zip(r-4.4)eSDM_0.4.4.zip(r-4.3)
eSDM_0.4.4.tgz(r-4.5-any)eSDM_0.4.4.tgz(r-4.4-any)eSDM_0.4.4.tgz(r-4.3-any)
eSDM_0.4.4.tar.gz(r-4.5-noble)eSDM_0.4.4.tar.gz(r-4.4-noble)
eSDM_0.4.4.tgz(r-4.4-emscripten)eSDM_0.4.4.tgz(r-4.3-emscripten)
eSDM.pdf |eSDM.html
eSDM/json (API)
NEWS

# Install 'eSDM' in R:
install.packages('eSDM', repos = c('https://swfsc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/swfsc/esdm/issues

Pkgdown site:https://swfsc.github.io

Datasets:

On CRAN:

Conda:

6.07 score 11 stars 24 scripts 456 downloads 8 exports 56 dependencies

Last updated 6 months agofrom:be2f911c1f. Checks:9 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 06 2025
R-4.5-winOKMar 06 2025
R-4.5-macOKMar 06 2025
R-4.5-linuxOKMar 06 2025
R-4.4-winOKMar 06 2025
R-4.4-macOKMar 06 2025
R-4.4-linuxOKMar 06 2025
R-4.3-winOKMar 06 2025
R-4.3-macOKMar 06 2025

Exports:ensemble_createensemble_rescaleeSDM_GUIevaluation_metricsmodel_abundanceoverlay_sdmpts2poly_centroidspts2poly_vertices

Dependencies:base64encbitopsbslibcachemcaToolsclassclassIntclicommonmarkcrayonDBIdigestdplyre1071fansifastmapfontawesomefsgenericsgluegplotsgtoolshtmltoolshttpuvjquerylibjsonliteKernSmoothlaterlifecyclemagrittrMASSmemoisemimepillarpkgconfigpromisesproxypurrrR6rappdirsRcpprlangROCRs2sasssfshinysourcetoolstibbletidyselectunitsutf8vctrswithrwkxtable

Example analysis - Woodman et al 2019

Rendered fromexample-analysis.Rmdusingknitr::rmarkdownon Mar 06 2025.

Last update: 2024-10-02
Started: 2019-05-16